HyQue statistics

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Associated diseases

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HyQue specifications

Information


Unique identifier OMICS_23666
Name HyQue
Software type Package/Module
Restrictions to use None
Programming languages Java
Computer skills Basic
Stability Stable
Maintained No

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Information


Unique identifier OMICS_23666
Name HyQue
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Input data A hypothesis and a set of SPIN rules.
Operating system Unix/Linux
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained No

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Publication for HyQue

HyQue in publications

 (2)
PMCID: 3471346
PMID: 22373303
DOI: 10.1186/1471-2105-13-S1-S10

[…] []. here, the user can derive hypotheses from hybrow's knowledge base of functional biological information and test them using various high-throughput data sources. the latest incarnation, hyque [], uses owl to create a semantic web representation of its underlying knowledge base. like the work presented here, it allows the testing of hypotheses against a genomic knowledge base […]

PMCID: 3102888
PMID: 21624154
DOI: 10.1186/2041-1480-2-S2-I1

[…] the open biomedical ontologies, thus facilitating progress towards orthogonality. the tool for assessing the orthogonality of ontologies is available at http://obomap.bioontology.org., the paper “hyque: evaluating hypotheses using semantic web technologies” by alison callahan, michel dumontier and nigam shah presents a semantic web based system for the evaluation of user submitted hypotheses […]


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HyQue institution(s)
Stanford Center for Biomedical Informatics Research, School of Medicine, Stanford University, Stanford California, AC, USA; Molecular Bioinformatics Laboratory, Millennium Institute on Immunology and Immunotherapy, Portugal; Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
HyQue funding source(s)
Supported by a Natural Sciences and Engineering Research Council of Canada (NSERC) Post Graduate Scholarship; the Emerging Leaders in the Americas Program (ELAP; Government of Canada), the Millennium Institute on Immunology and Immunotherapy, and La Comisión Nacional de Investigación Científica y Tecnológica (CONICYT; Government of Chile); an NSERC Discovery Grant and an Ontario Ministry of Research Innovation Early Researcher Award.

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