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Copy number and gene expression data integration
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iBAG specifications
Information
| Unique identifier | OMICS_09006 |
|---|---|
| Name | iBAG |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux, Mac OS, Windows |
| Programming languages | R |
| Computer skills | Advanced |
| Stability | Stable |
| Maintained | No |
Versioning
No version available
Maintainer
This tool is not available anymore.
Publication for iBAG
2013 Bioinformatics
PMCID: 3546799
PMID: 23142963
DOI: 10.1093/bioinformatics/bts655
iBAG citation
library_books
Association of CpG island methylator phenotype and EREG/AREG methylation and expression in colorectal cancer
2016
Br J Cancer
PMCID: 4984478
PMID: 27272216
DOI: 10.1038/bjc.2016.87
[…] e and multivariate Cox regression analyses were performed using IBM SPSS Statistics version 21 (Armonk, NY, USA). In addition, integrated Bayesian analysis of high-dimensional multiplatform genomics (iBAG) () data was performed using the nonlinear approach () to determine the percent of variability in expression that is explained by methylation. This method involved fitting an additive regression […]
iBAG institution(s)
Department of Biostatistics; Department of Bioinformatics and Computational Biology, The University of Texas, MD Anderson Cancer Center, Houston, TX, USA
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