iCall specifications

Information


Unique identifier OMICS_03313
Name iCall
Software type Package/Module
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability Stable
Maintained Yes

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Publication for iCall

iCall in publications

 (3)
PMCID: 3675871
PMID: 23761854
DOI: 10.1364/BOE.4.000924

[…] by applying to the 150 × 150 pixel image icorig (subscript c denotes the cartesian domain), where normalize(x,y,z) indicates a linear normalization of the elements in matrix x to range from y to z.icall=normalize(log(normalize(icorig,0.1,0.9)),0,1)(1)the range 0.1 to 0.9 was chosen to increase the contrast between the dimmest and brightest pixels, as well as to avoid the log(0) and log(1) […]

PMCID: 3342188
PMID: 22567602
DOI: 10.1364/BOE.3.001127

[…] the target structure with similarly-shaped extraneous features, while shape estimation results in a more accurate quasi-polar transform, as will be discussed in section 2.2., for a grayscale image icall∈ℜf×g in the cartesian domain, the pilot estimates can be represented as a binary image bcall, where, and z=(i,j) denotes the pixel at the ith row and jth column of the image. many basic […]

PMCID: 3339294
PMID: 22563254
DOI: 10.4196/kjpp.2012.16.2.97

[…] to obtain the se of ebe, the square roots of the diagonal elements of postv have to be printed using, for example, file stream 56 (i.e., 'fort.56')., finally, file stream 56 has to be closed at icall=3 step. this is not necessary if extra files are not opened within $table step. however, explicit closing of the open file stream is recommended for safe termination of nonmem® vi. if $pred […]


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iCall institution(s)
Department of Statistics and Applied Probability, Saw Swee Hock School of Public Health, National University of Singapore, Singapore; Genome Institute of Singapore, Singapore; NUS Graduate School for Integrative Science and Engineering, National University of Singapore, Singapore; Life Sciences Institute, National University of Singapore, Singapore

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