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Icbm2tal specifications


Unique identifier OMICS_27125
Name Icbm2tal
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java, MATLAB
Computer skills Advanced
Stability Stable
Java RE
Maintained Yes


No version available


  • person_outline Jack Lancaster

Publication for Icbm2tal

Icbm2tal citations


A supramodal role of the basal ganglia in memory and motor inhibition: Meta analytic evidence

PMCID: 5759998
PMID: 29199109
DOI: 10.1016/j.neuropsychologia.2017.11.033
call_split See protocol

[…] e ALE method (); no additional FWHM; cluster analysis peaks at all extrema. Where applicable, coordinates reported in Talairach space in the original studies were transformed into MNI space using the icbm2tal transform in GingerALE (, ) prior to the analyses.The first step of the meta-analytic approach is to examine the spatial convergence across different studies within each task domain. To do th […]


Activity alterations in the bed nucleus of the stria terminalis and amygdala during threat anticipation in generalized anxiety disorder

PMCID: 5714227
PMID: 28981839
DOI: 10.1093/scan/nsx103
call_split See protocol

[…] he bilateral amygdala was defined based on the Automated Anatomical Labeling (AAL) atlas included in the Wake Forest University PickAtlas software (; ; ) and transformed into Talairach space () using ICBM2TAL in Matlab (v8.2, The MathWorks Inc, Natick, Massachusetts, USA). The ROI for the bilateral BNST was defined based on an anatomical atlas (see ) (; ).Correction for multiple comparisons was pe […]


Learning about Expectation Violation from Prediction Error Paradigms – A Meta Analysis on Brain Processes Following a Prediction Error

Front Psychol
PMCID: 5532445
PMID: 28804467
DOI: 10.3389/fpsyg.2017.01253

[…] contrasts in the analysis. If the coordinates were reported in Talairach space they were transformed to Montreal Neurologic Institute (MNI) space using the GingerAle software (, ), which utilizes the icbm2tal transform algorithm (). In total, we included 446 foci into the analysis. […]


Neuroimaging studies in patients with psychogenic non epileptic seizures: A systematic meta review

PMCID: 5544493
PMID: 28808618
DOI: 10.1016/j.nicl.2017.07.025

[…] tatistically determines whether the convergent brain areas or clusters reported are greater than expected by chance. All available coordinates were transformed from MNI space to Talairach space using icbm2tal transform (, ) provided by brainmap.org (). Given that this was an exploratory analysis, and as noted by both uncorrected p values and FDR corrected thresholds are not always optimal, we opt […]


A Meta Analytic Study of the Neural Systems for Auditory Processing of Lexical Tones

Front Hum Neurosci
PMCID: 5526909
PMID: 28798670
DOI: 10.3389/fnhum.2017.00375

[…] tory lexical decision studies respectively. Prior to the analysis, all coordinates were transformed into a single stereotactic space: all MNI coordinates were converted into Talairach space using the icbm2tal transform tool (Lancaster et al., ) implemented in GingerALE software package (Eickhoff et al., , ). ALE maps were generated by the ALE method (Turkeltaub et al., ), using a full-width half-m […]


The neural basis of emotions varies over time: different regions go with onset and offset bound processes underlying emotion intensity

PMCID: 5597870
PMID: 28402478
DOI: 10.1093/scan/nsx051

[…] In addition to the mentioned threshold, we also provide FWER cluster-corrected and voxel-wise FDR corrected results. Resulting peaks were subsequently transformed into the Talairach space through the icbm2tal transform (; ) and labelled using the Talairach atlas (, ). When multiple peaks were located in the same Talairach region and Brodmann area, only the highest one was reported. […]

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Icbm2tal institution(s)
Research Imaging Center, University of Texas Health Science Center, San Antonio, TX, USA; International Consortium for Brain Mapping, UCLA, Los Angeles, CA, USA; McConnell Brain Imaging Center, Montreal Neurological Institute, Montreal, QC, Canada; Institute of Medicine and Brain Imaging Center West (BICW), Julich, Germany; Department of Neurology, Brain Mapping Center, David Geffen School of Medecine, UCLA, Los Angeles, CA, USA

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