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IDBA-UD | A de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

A iterative De Bruijn Graph De Novo Assembler for Short Reads Sequencing data with Highly Uneven Sequencing Depth.

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lille my

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Quit accurate, not very easy to use

IDBA-UD forum

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IDBA-UD classification

IDBA-UD specifications

Unique identifier:
OMICS_01423
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes

IDBA-UD distribution

versioning

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No versioning.

Credits

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Publications

Institution(s)

Department of Computer Science, The University of Hong Kong, Pokfulam Road, Hong Kong

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