IDEAL-Q

[…] crease in imaginary refractive index (i.e., an increase in material absorption) causes the Q-factor to decrease significantly. Note that realistic Q-factor is determined by 1/Q=1/Q ideal + 1/Q abs (Q ideal: Q-factor with lossless material, Q abs: Q-factor with absorption losses) [], which indicates the material loss restricts the maximum Q-factor that can obtained through experiment. Therefore, in […]

[…] d search parameters. The Mascot search results were exported in extensive markup language (XML) data format.In the current study, protein quantitation was performed by a label-free approach using the IDEAL-Q software. The spectral raw data were first converted into mzXML format using a computational tool, massWolf v4.0 (http://sourceforge.net/projects/sashimi/files/massWolf (MassLynx converter)). […]

[…] r are the patients with the most representative Q-sorts for this factor. Only the Q-sorts of patients loading on a specific factor were used for subsequent calculations. For each specific factor, an “ideal Q-sort” was created, showing how a hypothetical patient loading 100% on the factor would have ranked the statements. To interpret and name the factor, we used the Z-scores of the statements in t […]

[…] respectively. All MS raw data were processed with Proteome Discover version 2.1 (Thermo Fisher Scientific). For label-free quantification of palmitoylated peptides, data analysis was performed using IDEAL-Q software [34]. Membrane proteomic quantitation was performed by Proteome Discover version 2.1. Full experimental procedures are available in the supplementary data. […]

[…] The quantitation of phosphoproteomics and proteomics were performed by the SEMI label free algorithm by using IDEAL-Q software. Firstly, ReAdW (XCalibur, Thermo Finnigan) program was used to convert the raw data files acquired from the LTQ-Orbitrap into mzXML file format for peptide peak reconstruction. Secon […]

[…] This instrument [] measures the individual’s level of satisfaction with life at that moment in time. It includes five questions (q): "q1, my life is close to ideal; q2, conditions of my life are excellent; q3, I am satisfied with my life; q4, I have gotten the important things I want in life; q5, if I could live my life over, I would change almost nothing. […]