Tool stats & trends
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|Alternative name||Image Data Resource|
|Restrictions to use||None|
|Database management system||MySQL|
|User data submission||Not allowed|
Publication for Image Data Resource
A deep learning classifier identifies patients with clinical heart failure using whole slide images of HandE tissue
[…] dabhushi 2016 ; a deep learning tutorial with source code is hosted at http://www.andrewjanowczyk.com/deep-learning. The image data that support the findings of this study have been uploaded to the Image Data Resource  under accession number idr00042, which can be found at https://idr.openmicroscopy.org/webclient/. […]
Challenges for visualizing three‐dimensional data in genomic browsers
[…] a and image attributes such as frame, intensity, peak shape, etc. These files are unwieldy with raw file sizes of around 10 GB (60 MB when processed). However, these are now being catered for the new image data resource (IDR) initiative for coordinating imaging with genomic data built on the open microscopy environment's (OME) OMERO image data management platform . OMERO uses the BioFormats tool t […]
Knocking down the obstacles to functional genomics data sharing
[…] data records are clearly described in each publication. Notably, three of the screens relied on high-content imaging with all raw images made available in either figshare, Harvard Dataverse or the Image Data Resource (IDR; based on the Open Microscopy Environment ), demonstrating the feasibility of effectively describing and sharing data even in these challenging cases.The publications within […]
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