Searches for germline variable (V), diversity (D) and joining (J) genes matches for T-cell receptor (TCR) and immunoglobulin (IG) sequences using BLAST algorithm. Works both with amino-acid and nucleotide sequences and supports alignment to IMGT(R) germline sequence database, as well as custom databases. Provides information of CDR1,2 and FR1,2,3 region markup and germline sequence mutations.

User report

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0 user reviews

No review has been posted.

IgBLAST forum

No open topic.

IgBLAST versioning

No versioning.

IgBLAST classification

IgBLAST specifications

Software type:
Package
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Interface:
Command line interface
Biological technology:
Illumina, Roche
Programming languages:
C++
Stability:
Stable

User report

0 user reviews

0 user reviews

No review has been posted.

IgBLAST forum

No open topic.

IgBLAST classification

IgBLAST specifications

Interface:
Web user interface
Biological technology:
Illumina, Roche
Computer skills:
Basic
Restrictions to use:
None
Programming languages:
C++
Stability:
Stable

Credits

Publications

Link to literature

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