IGGalaxy statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

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IGGalaxy specifications

Information


Unique identifier OMICS_07009
Name IGGalaxy
Alternative name ImmunoGlobulin Galaxy
Interface Web user interface
Restrictions to use None
Biological technology Illumina, Roche
Programming languages Perl, Python, R
Computer skills Basic
Stability Stable
Maintained No

Publication for ImmunoGlobulin Galaxy

IGGalaxy in publications

 (2)
PMCID: 5636940
PMID: 28546550
DOI: 10.1038/icb.2017.43

[…] identifier sequence and trimmed using the antigen receptor galaxy (argalaxy) tool. fasta files were uploaded in imgt/high v-quest, and subsequently, the imgt output files were analyzed in the iggalaxy tool. to exclude low-quality reads, we only included transcripts of which the exact cdr1-cdr3 nucleotide sequence occurred twice or more. information on junction characteristics, cdr3 […]

PMCID: 5066086
PMID: 27799928
DOI: 10.3389/fimmu.2016.00410

[…] repertoire of 38 hd from cord blood to the age of 74 years. we used next generation sequencing to generate this reference data set and analyzed the repertoire using an updated version of our iggalaxy analysis pipeline ()., peripheral blood and cord blood samples were collected from 38 hd of different ages (supplementary table 1 in data sheet 2). from all donors, peripheral blood or cord […]


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IGGalaxy institution(s)
Department of Bioinformatics, Erasmus University Medical Center, Rotterdam, Netherlands

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