tutorial arrow
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.


Performs error-correction of immunosequencing reads and uses mass spectra to validate the constructed antibody repertoires. IgRepertoireConstructor takes Illumina MiSeq paired end reads as an input and expect that each left and right reads overlap and cover variable region of antibody. IgRepertoireConstructor stitches paired-end reads and removes contaminations using alignment of stitched reads against Ig germline database. This procedure significantly improves quality of input reads and allows one to constructs reads covering variable region of antibody.

User report

tutorial arrow
Vote up tools and offer feedback
Give value to tools and make your expertise visible

0 user reviews

0 user reviews

No review has been posted.

IgRepertoireConstructor forum

tutorial arrow
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.

No open topic.

IgRepertoireConstructor versioning

tutorial arrow
Upload and version your source code
Get your DOI for better tool traceability. Archive your releases so the community can easily visualize progress on you work.

No versioning.

IgRepertoireConstructor classification

IgRepertoireConstructor specifications

Software type:
Restrictions to use:
Operating system:
Computer skills:
Command line interface
Biological technology:
Programming languages:
C++, Python

IgRepertoireConstructor support


  • Pavel A. Pevzner < >


tutorial arrow
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.



Center for Algorithmic Biotechnology, St. Petersburg State University, St. Petersburg, Russia; Algorithmic Biology Laboratory, St. Petersburg Academic University, St. Petersburg, Russia; Bioinformatics Program, University of California, San Diego, CA, USA; Genentech, South San Francisco, CA, USA; Department of Computer Science and Engineering, University of California, San Diego, CA, USA

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.