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iHam specifications


Unique identifier OMICS_33197
Name iHam
Alternative name interactive Hierarchical orthologous groups Analysis Method
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Javascript
Computer skills Advanced
Version 1.0.0
Stability Stable
Maintained Yes




No version available



  • person_outline Christophe Dessimoz

Publication for interactive Hierarchical orthologous groups Analysis Method

iHam citations


Relationship between Bone Density and Biochemical Markers of Bone among Two Groups Taking Carbamazepine and Sodium Valproate for Epilepsy in Comparison with Healthy Individuals in Yazd

Electron Physician
PMCID: 5217819
PMID: 28070260
DOI: 10.19082/3257

[…] within bone during childhood and adolescence, bone metabolism increases during this period. Increased bone density continues until adulthood. Thereby, the difference can be attributed to this issue. Iham Block showed that alkaline phosphatase and PTH were within normal range (). However, a significant increase was observed in these factors compared to the control group. Alberto Veroti showed that […]


First Detection of Leishmania tropica DNA and Trypanosoma Species in Sergentomyia Sand Flies (Diptera: Psychodidae) from an Outbreak Area of Cutaneous Leishmaniasis in Ghana

PLoS Negl Trop Dis
PMCID: 3916256
PMID: 24516676
DOI: 10.1371/journal.pntd.0002630

[…] ing isolates from Ghana, Egypt, Kenya, Sudan and Tunisia. The ITS1 sequences obtained from 1 unfed S. ingrami pool from Taviefe [IING/GH/2007/TAV-51 (AB787189)] and 1 unfed S. hamoni pool from Klefe [IHAM/GH/2007/KLE-18 (AB787190)] were different at 4 positions of the nucleotides, which include the deletion of 2 nucleotides in the former. These samples showed high similarity with several L. tropic […]


Mapping carcass and meat quality QTL on Sus Scrofa chromosome 2 in commercial finishing pigs

PMCID: 2637027
PMID: 19284675
DOI: 10.1186/1297-9686-41-4

[…] am (HAM) and loin (LOIN) were weighed and further dissected into boneless subprimals and individual muscles. Skin and fat were removed from hams removed and four subprimals were weighted: inside ham (IHAM), outer ham (OHAM), knuckle ham (KHAM) and the lite butt ham (LBHAM,i.e. part of the gluteus medius muscle). Together they summed to boneless ham muscle weight (BHAM). Loins were processed to a b […]


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iHam institution(s)
SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland; ETH Zurich, Computer Science, Zurich, Switzerland; Center for Integrative Genomics, University of Lausanne, Lausanne, Switzerland; Open Targets, Wellcome Genome Campus, Cambridge, UK; EMBL-European Bioinformatics Institute, Wellcome Genome Campus, Cambridge, UK; Department of Computational Biology, University of Lausanne, Lausanne, Switzerland; Department of Genetics, Evolution & Environment, University College London, London, UK; Department of Computer Science, University College London, London, UK
iHam funding source(s)
Supported by the Swiss National Science Foundation grant 150654, UK BBSRC grant BB/M015009/1, and the Swiss State Secretariat for Education, Research and Innovation (SERI).

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