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iHSP-PseRAAAC

Online

Identifies the heat shock protein (HSP) families using pseudo reduced amino acid alphabet composition. iHSP-PseRAAAC is a web-server and a predictor developed by incorporating the amino acid data into the general form of pseudo amino acid composition. The overall success rate achieved by this method in identifying the functional types of HSPs among the aforementioned six types was more than 87%, which was derived by the jack-knife test on a stringent benchmark dataset.

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iHSP-PseRAAAC classification

iHSP-PseRAAAC specifications

Interface:
Web user interface
Input data:
A query protein sequences.
Computer skills:
Basic
Maintained:
Yes
Restrictions to use:
None
Input format:
FASTA
Stability:
Stable

iHSP-PseRAAAC support

Maintainers

  • Hao Lin <>
  • Wei Chen <>

Credits

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Publications

Institution(s)

School of Public Health, Hebei United University, Tangshan, China; Department of Physics, School of Sciences, and Center for Genomics and Computational Biology, Hebei United University, Tangshan, China; Gordon Life Science Institute, Belmont, MA, USA; Key Laboratory for Neuro-Information of Ministry of Education, Center of Bioinformatics, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China; Center of Excellence in Genomic Medicine Research (CEGMR), King Abdulaziz University, Jeddah, Saudi Arabia

Funding source(s)

Supported by grants from the National Nature Scientific Foundation of China (61100092 and 61202256).

Link to literature

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