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Unique identifier OMICS_06712
Name IIID
Alternative name Insect Innate Immunity Database
Restrictions to use None
Maintained No

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Publication for Insect Innate Immunity Database

IIID citations

 (12)
library_books

Signals Involved in Regulation of Hepatitis C Virus RNA Genome Translation and Replication

2018
Front Microbiol
PMCID: 5857606
PMID: 29593672
DOI: 10.3389/fmicb.2018.00395

[…] eractions between both genome ends may also regulate a switch between translation and replication. The bulge of the CRE 5BSL3.2 in the NS5B sequence (GCCCG) can interact with the loop of the small SL IIId (UCCCU) in the large IRES SL III domain (, , ) (Figures , ). Since the GGG sequence in the SL IIId loop is a main determinant in the isolated IRES RNA that is required for 40S ribosome binding () […]

library_books

Identification and Characterization of C type Lectins in Ostrinia furnacalis (Lepidoptera: Pyralidae)

2018
PMCID: 5842395
DOI: 10.1093/jisesa/iey011

[…] investigate the evolutionary relationships between CTLs of O. furnacalis and other insects, we retrieved 77 CTL protein sequences from 19 insect species by BLASTP searches in GenBank, VectorBase, and Insect Innate Immunity Database. Since no CTLs with other complicated structural unites than CTL domains are currently identified in O. furnacalis, we did not included M.sexta CTL-Xs and their ortholo […]

library_books

Profiling the Mismatch Tolerance of Argonaute 2 through Deep Sequencing of Sliced Polymorphic Viral RNAs

2017
Mol Ther Nucleic Acids
PMCID: 5602524
PMID: 29246301
DOI: 10.1016/j.omtn.2017.08.010

[…] riability within the siRNA6 hybridization site, against which siRNA6 might be more active. However, we considered this highly unlikely for three reasons. First, the siRNA6 target site lies within the IIId domain of the 5′ non-coding region of HCV, a highly structured RNA conserved across HCV genotypes and even into picornaviruses. Second, historical in vitro and in vivo data with a semiquantitativ […]

library_books

Identification and expression analysis of the apple (Malus × domestica) basic helix loop helix transcription factor family

2017
Sci Rep
PMCID: 5428380
PMID: 28174429
DOI: 10.1038/s41598-017-00040-y

[…] various stresses. Since bHLH TFs are known to regulate stress responses we also analyzed the expression patterns of MdbHLH genes in response to salt stress.Of the 23 MdbHLH subgroups, three (Ib (2), IIId + e and XV) include only angiosperm protein encoding genes, while the remaining 20 include proteins from both angiosperms and lycophytes. Since the last common ancestor of angiosperms and lycophy […]

library_books

The Sweet Potato NAC Domain Transcription Factor IbNAC1 Is Dynamically Coordinated by the Activator IbbHLH3 and the Repressor IbbHLH4 to Reprogram the Defense Mechanism against Wounding

2016
PLoS Genet
PMCID: 5079590
PMID: 27780204
DOI: 10.1371/journal.pgen.1006397

[…] bbHLH3 is closely related to group IIIe of bHLH transcription factor, which contains the transcriptional activators AtMYC2, AtMYC3 and AtMYC4 [,]. On the other hand, IbbHLH4 was classified into group IIId, which includes the transcriptional repressors JAMs (). To verify the roles of IbbHLH3 and IbbHLH4, we performed a transactivation reporter assay in yeast strain AH109 (GALUAS-TATA::LacZ). IbbHLH […]

library_books

A proteomics approach reveals molecular manipulators of distinct cellular processes in the salivary glands of Glossina m. morsitans in response to Trypanosoma b. brucei infections

2016
PMCID: 4969678
PMID: 27485005
DOI: 10.1186/s13071-016-1714-z

[…] ehayde-3-phosphate dehydrogenase; GO, gene ontology; GPI, glycosylphosphatidyl inositol; GS, glutamine synthetase; GST1, glutathione S-transferase 1; iBAQ, intensity-based absolute quantitation; IID, insect innate immunity database; IPR, iron regulatory protein; ISG, invariant surface glycoprotein; IVD, isovaleryl-CoA dehydrogenase; KMP-11, 11-kDa kinetoplastid membrane protein-11; LC-MS/MS, liqui […]

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IIID institution(s)
Department of Biological Sciences, Vanderbilt University, Nashville, TN, USA

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