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Information


Unique identifier OMICS_05412
Name iLoc-Euk
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for iLoc-Euk

iLoc-Euk citations

 (9)
library_books

Expression, Localization of SUMO 1, and Analyses of Potential SUMOylated Proteins in Bubalus bubalis Spermatozoa

2017
Front Physiol
PMCID: 5468435
PMID: 28659810
DOI: 10.3389/fphys.2017.00354

[…] nih.gov) (Geer et al., ). The Prediction of Sub Cellular Location (SCL) was performed using two packages for prediction in eukaryotic and animal proteins with single or multiple sites as follows: (I) iLoc-Euk (http://www.jci-bioinfo.cn/iLoc-Euk) (Chou et al., ) and (II) iLoc-Animal (http://www.jci-bioinfo.cn/iLoc-Animal) (Lin et al., ). The protein sequences (in fasta format) were sent via user in […]

library_books

Prediction of endoplasmic reticulum resident proteins using fragmented amino acid composition and support vector machine

2017
PeerJ
PMCID: 5588793
PMID: 28890846
DOI: 10.7717/peerj.3561

[…] al system. Since ERPred prediction is not organism/taxa specific hence we compared our method with those methods which are not restricted to a particular organism or plant/animal like Cello v.2.5 (), iLoc-Euk () and Euk-mPLoc 2.0 () (an updated version of Euk-mPloc ()) using independent dataset. The sensitivity of ERPred on independent dataset was 72.31% with 83.69% specificity while for Cello v.2 […]

library_books

Predicting Subcellular Localization of Apoptosis Proteins Combining GO Features of Homologous Proteins and Distance Weighted KNN Classifier

2016
Biomed Res Int
PMCID: 4860209
PMID: 27213149
DOI: 10.1155/2016/1793272

[…] ticularly interesting because they may have some very special biological functions intriguing to investigators in both basic research and drug discovery. So far, many outstanding predictors, that is, iLoc-Euk [], iLoc-Plant [], MLPred-Euk [], MultiP-SChlo [], mGOASVM [], and HybridGO-Loc [], were also developed into web-servers used to cope with the multiple location problems in eukaryotic, plant, […]

library_books

Find novel dual agonist drugs for treating type 2 diabetes by means of cheminformatics

2013
Drug Des Devel Ther
PMCID: 3623550
PMID: 23630413
DOI: 10.2147/DDDT.S42113

[…] such as G-protein-coupled receptors-grey incident degree analysis (GPCR-GIA) and G-protein-coupled receptors -2-layer predictor (GPCR-2L) for identifying G protein-coupled receptors and their types,, iLoc-Euk and iLoc-Hum for predicting subcellular localization of eukaryotic and human proteins,, NR-2L for identifying nuclear receptors and their subfamilies, ProtIdent for identifying proteases and […]

library_books

Multi Label Multi Kernel Transfer Learning for Human Protein Subcellular Localization

2012
PLoS One
PMCID: 3374840
PMID: 22719847
DOI: 10.1371/journal.pone.0037716

[…] rformance estimation experiments: one experiment is overall performance estimation on locative dataset, where multiplex protein is viewed as multiple singlex proteins as Hum-mPLoc 2.0 , Virus-mPLoc , iLoc-Euk , iLoc-Virus and Plant-mPLoc did; the other experiment is multi-labelling estimation for multiplex proteins. The first experiment is similar to traditional supervised learning estimation ex […]

library_books

Imbalanced Multi Modal Multi Label Learning for Subcellular Localization Prediction of Human Proteins with Both Single and Multiple Sites

2012
PLoS One
PMCID: 3371015
PMID: 22715364
DOI: 10.1371/journal.pone.0037155

[…] sented an algorithm named YLoc by using the simple naive Bayes classifier. Lin et al. proposed a knowledge based approach by using the local sequence similarity. Recently, four new approaches called iLoc-Euk , iLoc-Gneg , iLoc-Plant and iLoc-Virus were proposed based on a multi-label classifier to predict the subcellular locations of eukaryotic, Gram-negative bacterial, plant, and virus protein […]

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iLoc-Euk institution(s)
Gordon Life Science Institute, San Diego, CA, USA

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