A package designed to automate the pipeline for analyzing site-level and region-level methylation changes in epigenetic studies utilizing the 450K DNA methylation microarray.

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IMA classification

IMA specifications

Software type:
Package
Restrictions to use:
None
Programming languages:
R
Stability:
Stable
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced

Publications

  • (Wang et al., 2012) IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data. Bioinformatics.
    Published on: 2012 Mar 01
    PMID: 22253290

Link to literature

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