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Image acquisition software tools | Bioimaging

Biological laboratories usually acquire images by measuring photon flux in parallel (using a camera) or sequentially (using a point detector and equipment that scans the area of interest). Although capturing an image from a camera into the computer…
Leginon
Desktop

Leginon

Allows automated collection of images from a transmission electron microscope.…

Allows automated collection of images from a transmission electron microscope. Leginon proposes a flexible architecture to allow for the development of customized data collection protocols. The…

SCIFIO
Desktop

SCIFIO SCientific Image Format Input and Output

A library software to create extensible framework for the reading, writing, and…

A library software to create extensible framework for the reading, writing, and translation of images. SCIFIO was designed to provide the architecture that will equally facilitate: i) the conversion…

StabiTissue
Desktop

StabiTissue

Stabilizes in vivo intravital microscopy images that suffer from soft-tissue…

Stabilizes in vivo intravital microscopy images that suffer from soft-tissue background movement. StabiTissue quantifies the coincidence between image pairs from randomly distributed image regions.…

SerialEM
Desktop

SerialEM

Uses an approach based on prediction of specimen position during the tilt…

Uses an approach based on prediction of specimen position during the tilt series from the position at previous tilts. SerialEM is a program that can acquire a variety of data from electron…

ScanImage
Desktop

ScanImage

A simple, software-based approach to operating a laser scanning microscope…

A simple, software-based approach to operating a laser scanning microscope without the need for custom data acquisition hardware. Data acquisition and control of laser scanning are achieved through…

AxioVision
Desktop

AxioVision

Allows to visualize and present your images in several dimensions. The…

Allows to visualize and present your images in several dimensions. The functionality of this imaging toolbox expands constantly with a wide range of different modules that are tailored to specific…

Image-Pro
Desktop

Image-Pro

Includes the latest tools for scientific and industrial image analysis and…

Includes the latest tools for scientific and industrial image analysis and image processing. Image-Pro offers 64-bit support, a user-friendly interface, intuitive macros and app building tools, new…

NIS-Elements BR
Desktop

NIS-Elements BR

It is scaled to manage basic research applications. While not as full featured…

It is scaled to manage basic research applications. While not as full featured as the Advanced Research module, BR offers most of the total imaging solutions as its more powerful counterpart. With…

Volocity
Desktop

Volocity

Provides all the tools you need to visualize, analyze and validate 3D…

Provides all the tools you need to visualize, analyze and validate 3D fluorescence images from a wide range of confocal microscopy, widefield and high content screening systems and is fully…

MetaMorph
Desktop

MetaMorph

It is the ideal "glue" for easily integrating dissimilar fluorescent…

It is the ideal "glue" for easily integrating dissimilar fluorescent microscope hardware and peripherals into a single custom workstation, while providing all the tools needed to perform…

μManager
Desktop

μManager Micro-Manager

A software package for control of automated microscopes. Together with the…

A software package for control of automated microscopes. Together with the image processing application ImageJ, μManager provides a comprehensive, freely available, imaging solution. μManager has a…

SlideBook
Desktop

SlideBook

Advances research microscopy through the entire experimental process. By…

Advances research microscopy through the entire experimental process. By managing everything from instrument control to image processing and data analysis, SlideBook allows scientists to focus on…

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