Virtual microscopy, which is the diagnostic work on completely digitized histological and cytological slides as well as blood smears, is at the stage to be implemented in routine diagnostic surgical pathology (tissue-based diagnosis) in the near future, once it has been accepted by the US Food and Drug Administration.[…] Automated extraction of content-based image information requires shading correction, constant maximum of grey values, and standardized grey value histograms.
Allows image correction and can be applied to high-content images, WSIs (Whole Slide Images) and high-throughput time-lapse movies. BaSiC is a retrospective image correction method for optical microscopy, available as a Fiji/ImageJ Plugin. It’s based on low-rank and sparse decomposition which solves both issues. It can correct temporal drift in time-lapse microscopy data and thus improve continuous single-cell quantiﬁcation.
Provides early image quality feedback and automatically identifies regions of the image that require additional focus points. Sharpa is a sharpness assessment tool for NDPI whole slide images, also called virtual slides. The method is designed to begin with a batch scanning process. Blur detection of one slide can be performed during the scanning of other slides. The whole slide scanner operator does not have to wait until the end of the scan (of dozens of slides) before reviewing each slide and rescanning if necessary.
Allows the analysis of digital pathology images. MatDigitalPathology includes Matlab features (functions and interfaces). This features allows to support analysis of digital pathology images: (1) it provides color normalization of images to improve the consistency of segmentation and feature extraction algorithms, (2) permits color deconvolution of images, (3) enables the read of whole-slide imaging formats.
Provides assistance for quantitative image analysis within cancer diagnostics. ONCOTOPIX intends to automate most of the daily routines of a pathologist’s work. It contains several software modules that covers multiple features such as visualization of scanned tissue slides or analysis of immunohistochemistry (IHC) and In-Situ Hybridization (ISH). This software is compatible with dedicated scanning hardware.
Assists in shifting, stretching and rotating the red green and blue planes in a red, green, blue (RGB) image. Align RGB planes is a plugin developed for the ImageJ platform. The application contains a macro to resize images for not affecting them by the cropping due to the rotation.
You can access more results by creating a free plan account or unlimited content via a premium account.