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Image registration software tools | Single plane illumination microscopy

Image registration is the process of overlaying images (two or more) of the same scene taken at different times, from different viewpoints, and/or by different sensors. The registration geometrically align two images (the reference and sensed…
Atlas Toolkit
Desktop

Atlas Toolkit

Consists in a collection of tools developed to achieve group-wise elastic…

Consists in a collection of tools developed to achieve group-wise elastic registration of 3D objects by decomposing the alignment problem into a sequence of orthogonal 2D elastic registrations. Atlas…

Register…
Desktop

Register Virtual Stack Slices

Provides a method for elastic and consistent registration of histological…

Provides a method for elastic and consistent registration of histological sections. Register Virtual Stack Slices is an ImageJ plugin that uses a sequence of image slices stored in a folder, and…

HyperStackReg
Desktop

HyperStackReg

Aligns images in a multi-channel hyperstack. The HyperStackReg purpose is to…

Aligns images in a multi-channel hyperstack. The HyperStackReg purpose is to apply the same transformation matrix to each channel of a hyperstack. This tool is an ImageJ plugin, offering a graphical…

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