Unlock your biological data

?

Try: RNA sequencing CRISPR Genomic databases DESeq

1 - 10 of 10 results
filter_list Filters
settings_input_component Operating System
tv Interface
computer Computer Skill
copyright License
1 - 10 of 10 results
Quantinetix
star_border star_border star_border star_border star_border
star star star star star
(1)
Provides quantitation of target compounds (taking into account biological matrix effect) following Mass spectrometry imaging experiments. Quantinetix is a Quantitative Imaging Mass Spectrometry Software which offers normalization to get “real images” and provides concentration of target compounds. It is specially designed to ADMET study, PK/PD study, Toxicity study, In support of Whole Body Autoradiography and Proteomics and Lipidomics studies.
msIQuant
Enables the visualization, analysis of large data sets. msIQuant allows users to display and study data sets without data reduction. It has a quantitation function that generates calibration standard curves from series of standards that can be used to determine the concentrations of specific analyses. In summary, it supplies solution for accessing and evaluating data sets, quantifying drugs and endogenous compounds in tissue areas of interest, and for processing mass spectra and images.
MSI.R
A collection of R scripts for the efficient evaluation of .imzML archives in a four-step strategy: (1) calculation of the density distribution of mass-to-charge ratio (m/z) signals in the .imzML file and assembling of a pseudo-master spectrum with peak list, (2) automated generation of mass images for a defined scan range and subsequent visual inspection, (3) visualisation of individual ion distributions and export of relevant .mzML spectra and (4) creation of overlay graphics of ion images and photographies. The use of a Hue-Chroma-Luminance (HCL) colour model in MSI graphics takes into account the human perception for colours and supports the correct evaluation of signal intensities. Further, readers with colour blindness are supported. Contour maps promote the visual recognition of patterns in MSI data, which is particularly useful for noisy data sets.
SCILS Lab
New
Assists users to analyze mass spectrometry imaging data. SCILS Lab includes a lot of functionalities allowing researchers to display multiple samples in both 2D and 3D and permitting a multitude of applications in pharmaceutical, medical, and industrial research. This software is composed of several features among which comparative analysis for uncovering discriminative m/z-markers, classification model calculation based on training data and classification of new samples, or extraction of underlying trends.
omniSpect
Obsolete
An open source web- and MATLAB-based software tool for both DESI and MALDI mass spectrometry imaging (MSI) that performs computationally intensive functions on a remote server. These functions include converting data from a variety of file formats into a common format easily manipulated in MATLAB, transforming time-series mass spectra into mass spectrometry images based on a probe spatial raster path, and multivariate analysis. OmniSpect provides an extensible suite of tools to meet the computational requirements needed for visualizing open and proprietary format MSI data.
0 - 0 of 0 results

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.