ImarisTrack statistics

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Citations per year

Number of citations per year for the bioinformatics software tool ImarisTrack

Tool usage distribution map

This map represents all the scientific publications referring to ImarisTrack per scientific context
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Associated diseases


Popular tool citations

chevron_left 3D image analysis Colocalization analysis Particle tracking Colocalization analysis 3D image surfacing chevron_right
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ImarisTrack specifications


Unique identifier OMICS_06586
Name ImarisTrack
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Mac OS, Windows
License Commercial
Computer skills Medium
Stability Stable
Maintained Yes


No version available

ImarisTrack citations


A new holistic 3D non invasive analysis of cellular distribution and motility on fibroin alginate microcarriers using light sheet fluorescent microscopy

PLoS One
PMCID: 5560673
PMID: 28817694
DOI: 10.1371/journal.pone.0183336

[…] perform computational measurements and produce 3D movies.Only a few tools are currently available for tracking cells in 3D using z-stack of fluorescent images []. The most noteworthy solution is the ImarisTrack module of IMARIS. ImarisTrack offers a wide choice of multiple automatic tracking algorithms and provides researchers with a set of tools to support their analyses. Cells/particles are tra […]


Topological Small World Organization of the Fibroblastic Reticular Cell Network Determines Lymph Node Functionality

PLoS Biol
PMCID: 4945005
PMID: 27415420
DOI: 10.1371/journal.pbio.1002515

[…] f AlexaFluor 633-labeled Meca79 antibody was injected IV in order to label HEVs. Each image sequence lasted for 30 min. Acquired 3-D time-lapse images were tracked using Imaris software with Spot and ImarisTrack function. Average single cell speeds were calculated from 3-D coordinates of tracked cells using Matlab []. T cells attached to HEVs were not included in the analysis. Arrest coefficient, […]


An effective assay for high cellular resolution time lapse imaging of sensory placode formation and morphogenesis

BMC Neurosci
PMCID: 3115907
PMID: 21554727
DOI: 10.1186/1471-2202-12-37
call_split See protocol

[…] s into 2D images. To measure speed and velocity of placodal cell migration in 3D volume, we performed 4D tracking with Imaris (Bitplane) by modeling moving placodal nuclei with spot objects using the ImarisTrack module with manual corrections and Imaris MeasurementPro for calculations of the tracks. The orientation of cleavage planes with respect to apical surface was measured by the angle made be […]


Association of six YFP myosin XI tail fusions with mobile plant cell organelles

BMC Plant Biol
PMCID: 1802837
PMID: 17288617
DOI: 10.1186/1471-2229-7-6

[…] minimize cross-talk of GFP and YFP. For time lapse series YFP and chlorophyll were both excited at 488 nm and pictures were collected without frame averages. Organelle motility was measured with the ImarisTrack module from the Image Analyzing Software Imaris 5.0 (Bitplane AG, Zurich, Switzerland). Labeled organelles were detected with the spot function and tracks were analyzed by using the autore […]

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ImarisTrack institution(s)
Bitplane AG, Zurich, Switzerland; Bitplane Inc.,Concord, MA, USA

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