IMGT/V-QUEST statistics

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Associated diseases

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IMGT/V-QUEST specifications

Information


Unique identifier OMICS_00002
Name IMGT/V-QUEST
Alternative name IMGT/HighV-QUEST
Software type Application/Script
Interface Web user interface
Restrictions to use None
Input data Nucleotide sequence(s)
Input format FASTA
Computer skills Basic
Stability Stable
Maintained Yes

Maintainers


  • person_outline Véronique Giudicelli <>
  • person_outline Marie-Paule Lefranc <>
  • person_outline Sofia Kossida <>

Publications for IMGT/V-QUEST

IMGT/V-QUEST in publications

 (181)
PMCID: 5889503
DOI: 10.22034/ibj.22.3.180

[…] from uniprot at http://www.uniprot.org/ with ncbi accession number of p11836 at and from protein data bank at https://www.rcsb.org with pdb id.1s8b. ofatumumab antibody sequence was extracted from imgt/v-quest server (https://www.imgt.org/imgt _vquest/vquest) and fpo (http://www. freepatents online.com/) as well as from protein data bank with pdb id 3giz., the paratome web server[] […]

PMCID: 5897323
PMID: 29651132
DOI: 10.1038/s41598-018-24367-2

[…] (p, a, g, s, t)., imgt/highv-quest (version 1.3.1) was used for identification of sequences (vβ, dβ, jβ and cdr3), evaluation of functionality and statistical analysis of the sequence data; imgt/v-quest (version 3.3.1) was used for identification of cdr3 positions; microsoft office excel (version 2010) was used for storage, filtering and statistical calculation of the sequences. […]

PMCID: 5890998
PMID: 29630613
DOI: 10.1371/journal.pone.0195308

[…] described by fukui et al. []. the sequences of variable regions including framework regions (fr) 1, 2 and 3 and complementarity-determining regions (cdr) 1, 2 and 3 were assigned and aligned using imgt/v-quest (http://www.imgt.org) []., the use of laboratory animals in this study was approved by the university of nevada, reno institutional animal care and use committee (protocol number 00024). […]

PMCID: 5882926
PMID: 29615812
DOI: 10.1038/s41598-018-23889-z

[…] of the mabs were compared by clustal omega (http://www.ebi.ac.uk/tools/psa/emboss_needle/)., nucleotide sequences for the h and l chains of 6d2 and 8c3 were analyzed using version 3.4.0 of the imgt/v-quest tool for murine immunoglobulin sequences. this tool was used to identify the closest germline v region gene for each sequence and infer the v region family. the imgt unique numbering […]

PMCID: 5876289
PMID: 29628923
DOI: 10.3389/fimmu.2018.00493

[…] colonies were grown for each pcr band, plasmid dna purified using qiaprep spin miniprep kit (qiagen) and sequenced by source bioscience using the m13 forward primer. sequences were analyzed using imgt/v-quest ()., heavy and light chain variable regions were cloned in pvitro-hygro-1 (invivogen) using polymerase incomplete primer extension (pipe) cloning as previously described (). in brief, […]


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IMGT/V-QUEST institution(s)
IMGT, the international ImMunoGeneTics information system, Laboratoire d'ImmunoGénétique Moléculaire LIGM, Université Montpellier 2, Institut de Génétique Humaine IGH, UPR CNRS 1142, Montpellier, France
IMGT/V-QUEST funding source(s)
Supported by Centre National de la Recherche Scientifique CNRS, Ministère de l’Enseignement Supérieur et de la Recherche MESR (University Montpellier 2), Région Languedoc-Roussillon (GPTR, GEPETOS), Agence Nationale de la Recherche ANR (ANR-06-BYOS-0005-01), and European Community (ImmunoGrid, FP6-2004-IST-4).

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