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ImmQuant specifications

Information


Unique identifier OMICS_12769
Name ImmQuant
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java, R
Computer skills Medium
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Irit Gat-Viks

Publication for ImmQuant

ImmQuant citation

library_books

Cell type deconvolution from DNA methylation: a review of recent applications

2017
Hum Mol Genet
PMCID: 5886462
PMID: 28977446
DOI: 10.1093/hmg/ddx275

[…] es. Gene expression based deconvolution is also possible for cell-type resolution. Methods include CellMix () and CIBERSORT () for deconvolution of tissue expression profiles, as well as VoCAL () and ImmQuant () for inferring immune cell-type composition from expression data. These applications have shown promise. However, the number of transcripts can vary in a manner that is not as proportional […]


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ImmQuant institution(s)
Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel
ImmQuant funding source(s)
The European Research Council [637885] and the Edmond J. Safra Center for Bioinformatics at Tel-Aviv University

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