ImmunediveRsity statistics

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Citations per year

Number of citations per year for the bioinformatics software tool ImmunediveRsity

Tool usage distribution map

This map represents all the scientific publications referring to ImmunediveRsity per scientific context
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ImmunediveRsity specifications


Unique identifier OMICS_08094
Name ImmunediveRsity
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data RepSeq library raw reads
Output data Analysis results
Biological technology Illumina, Roche
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.0.8
Stability Stable
Python, C
Maintained Yes


No version available


Publication for ImmunediveRsity

ImmunediveRsity citations


3D: diversity, dynamics, differential testing – a proposed pipeline for analysis of next generation sequencing T cell repertoire data

BMC Bioinformatics
PMCID: 5327583
PMID: 28241742
DOI: 10.1186/s12859-017-1544-9

[…] ng and analysis of antigen receptor repertoire sequencing data at single-cell level by a relational database. Some of the tools, such as repgenHMM [], IMonitor [], IMEX/IMmunEXplorer [], Change-O [], ImmunediveRsity [], and VDJtools [] etc., could also measure repertoire diversity, but they only rely on one or two diversity indices, such as Shannon or Gini diversity. ImmunoSEQ Analyzer [] develope […]


Lower IgG somatic hypermutation rates during acute dengue virus infection is compatible with a germinal center independent B cell response

Genome Med
PMCID: 4766701
PMID: 26917418
DOI: 10.1186/s13073-016-0276-1
call_split See protocol

[…] We have developed a software (pipeline) named ImmunediveRsity for the analysis of the repertoire sequencing (Rep-Seq) data []. ImmunediveRsity is written in R language [] and automates Ig sequencing analysis from pre-processing, error correction […]


Longitudinal analysis of the peripheral B cell repertoire reveals unique effects of immunization with a new influenza virus strain

Genome Med
PMCID: 4658769
PMID: 26608341
DOI: 10.1186/s13073-015-0239-y

[…] We have developed ImmunediveRsity [], a bioinformatics analysis platform based on the R language for the automated analysis of the structural diversity of the B-lymphocyte repertoire. This data processing platform begi […]

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ImmunediveRsity institution(s)
Department of Immunology, Research Center for Infectious Diseases at the National Institute of Public Health (INSP-CISEI), Cuernavaca, Morelos, Mexico

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