immunoClust specifications

Information


Unique identifier OMICS_08082
Name immunoClust
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Artistic License version 2.0
Computer skills Advanced
Version 1.12.0
Stability Stable
Requirements
methods, stats, grid, graphics, BiocStyle, grDevices, lattice, R(>=3.3), flowCore
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Till Soerensen

Publication for immunoClust

immunoClust citations

 (2)
library_books

Monocyte alterations in rheumatoid arthritis are dominated by preterm release from bone marrow and prominent triggering in the joint

2017
PMCID: 5867420
PMID: 29191820
DOI: 10.1136/annrheumdis-2017-211649

[…] BM and blood samples from patients with OA and RA, matched blood and synovial samples from patients with RA and blood samples from RA and healthy donors were analysed by unsupervised clustering with immunoClust. […]

library_books

Competitive SWIFT cluster templates enhance detection of aging changes

2015
Cytometry
PMCID: 4737406
PMID: 26441030
DOI: 10.1002/cyto.a.22740

[…] eHive computing cluster, https://info.circ.rochester.edu/BlueHive/System_Overview.html). We selected subsets of eight Young and 8 Old subjects, and analyzed this smaller data set using both SWIFT and immunoClust. SWIFT identified 22 significant clusters (P <0.05 after the Benjamini‐Hochberg correction) whereas immunoClust did not identify any cluster with a BH‐corrected P values <1 (Supporting Inf […]

immunoClust institution(s)
Department of Rheumatology and Clinical Immunology, Charité, Berlin, Germany

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