Immunology software tools and databases

Immunology applications

Recently, massive factory-scale experimentation coupled to literature mining has allowed numerous functional immunology resources to emerge.

Immunology software tools and databases

Most Recent Tools

MAPs
Data

MAPs Modular Antibody Parts Database

Consists of 929 mostly-human, mostly-germline antibody "parts" that…

Consists of 929 mostly-human, mostly-germline antibody "parts" that can be used to assemble antibody variable domains. In MAPs, a model variable domain can be created for a target antibody…

OptCDR
Desktop

OptCDR

Is used in the de novo design of antibody binding pockets against specified…

Is used in the de novo design of antibody binding pockets against specified antigen epitopes. OptCDR proposes a four-step procedure. First, canonical structures are selected for the six…

SEPIa
Desktop

SEPIa

Uses a voting algorithm for combining the predictions of two classifiers, a…

Uses a voting algorithm for combining the predictions of two classifiers, a Gaussian Naïve Bayes and a Random Forest classifier. SEPIa is a conformational epitope prediction method that requires…

HITC
Data

HITC Human Immunology Project Consortium

Defines profiles, signatures, fingerprints of steady-state and activated human…

Defines profiles, signatures, fingerprints of steady-state and activated human immune system. Through the HITC, well-characterized human cohorts are studied using a variety of modern analytic tools,…

Most Popular Tools

Interferome
Data

Interferome

This database is an upgrade of the original database and contains type I, II…

This database is an upgrade of the original database and contains type I, II and III interferon (IFN) regulated genes, manually curated from publicly available microarray datasets.

ABCpred
Desktop

ABCpred

Predicts B cell epitope(s) in an antigen sequence, using artificial neural…

Predicts B cell epitope(s) in an antigen sequence, using artificial neural network. ABCpred is able to predict epitopes with 65.93% accuracy using recurrent neural network.

Curators for Immunology

  • Gajendra P. S. Raghava's avatar image
    Gajendra P. S. Raghava
    Bioinformatics Center, Institute…
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