Immunology software tools and databases

Immunology applications

Recently, massive factory-scale experimentation coupled to literature mining has allowed numerous functional immunology resources to emerge.

Immunology software tools and databases

Most Recent Tools

Desktop app
Human Leukocyte… Human Leukocyte Antigen-Convolutional Neural…

HLA-CNN Human Leukocyte Antigen-Convolutional Neural Network

Extracts a vector space distributed representation of amino acids from Human…

Extracts a vector space distributed representation of amino acids from Human Leukocyte Antigen (HLA) peptide data that preserved property critical for covalent bonding. HLA-CNN is a deep…

Web app
Cross-React Cross-React

Cross-React

Enables prediction of cross-reactivity between distantly related allergenic…

Enables prediction of cross-reactivity between distantly related allergenic proteins using their X-ray or homology modeled structures in combination with epitope analysis. Cross-React uses a patch…

Desktop app
RimmPort RimmPort

RimmPort

Prepares National Institute of Allergy and Infectious Diseases (NIAID)-funded…

Prepares National Institute of Allergy and Infectious Diseases (NIAID)-funded research study datasets in ImmPort for analysis in R. RImmPort comprises of three main components: (i) a specification of…

Desktop app
G T A T C G C T A TcellClonality TcellClonality

TcellClonality

An R script for processing MiTCR-derived CDR3 data from Peripheral T Cell…

An R script for processing MiTCR-derived CDR3 data from Peripheral T Cell Lymphoma (PTCL) RNA-seq. TcellClonality will remove non-productive CDR3 sequences, calculate the relative abundance of each…

Most Popular Tools

Interferome Interferome

Interferome

This database is an upgrade of the original database and contains type I, II…

This database is an upgrade of the original database and contains type I, II and III interferon (IFN) regulated genes, manually curated from publicly available microarray datasets.

Desktop app
ABCpred ABCpred

ABCpred

Predicts B cell epitope(s) in an antigen sequence, using artificial neural…

Predicts B cell epitope(s) in an antigen sequence, using artificial neural network. ABCpred is able to predict epitopes with 65.93% accuracy using recurrent neural network.

Curators for Immunology

  • Gajendra P. S. Raghava's avatar image
    Gajendra P. S. Raghava
    Bioinformatics Center, Institute…
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