ImmunomeBase specifications

Information


Unique identifier OMICS_04541
Name ImmunomeBase
Restrictions to use None
Maintained Yes

Publication for ImmunomeBase

ImmunomeBase citations

 (2)
library_books

Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys

2014
BMC Genomics
PMCID: 4174608
PMID: 25168586
DOI: 10.1186/1471-2164-15-738

[…] bacterial lysozyme in R. pedestris []. BMSB have twenty putative transcripts with homology to 66 of the 67 D. melanogaster lysozyme proteins in NR and 7 of the 7 D. melanogaster lysozyme proteins in ImmunomeBase [], suggesting that BMSB has a similar complement of lysozyme genes as D. melanogaster. This suggests that the presence of the bacterial lysozyme is not strictly related to the loss of th […]

library_books

Insights into the innate immunity of the Mediterranean mussel Mytilus galloprovincialis

2011
BMC Genomics
PMCID: 3039611
PMID: 21269501
DOI: 10.1186/1471-2164-12-69

[…] We used 2,915 Gene Ontology (GO) sequences associated with UniProt Knowledgebase (UniProtKB) below the node GO:0002376-Immune system processes [] and 4,216 sequences downloaded from the multispecies ImmunomeBase [] to seek related mussel transcripts by tBLASTn similarity search (cut-off 1.0E-4). A working list of 1,233 keywords relating to mussels and innate immunity also supported the extraction […]

ImmunomeBase institution(s)
Bioinformatics Research Group, Institute of Medical Technology, University of Tampere, Finland

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