iMotifs statistics

info info

Citations per year

info

Popular tool citations

chevron_left Motif comparison chevron_right
info

Tool usage distribution map

Tool usage distribution map
info info

Associated diseases

Associated diseases
Want to access the full stats & trends on this tool?

iMotifs specifications

Information


Unique identifier OMICS_08108
Name iMotifs
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Mac OS
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Documentation


Publication for iMotifs

iMotifs citations

 (2)
library_books

The two most common histological subtypes of malignant germ cell tumour are distinguished by global microRNA profiles, associated with differential transcription factor expression

2010
Mol Cancer
PMCID: 2993676
PMID: 21059207
DOI: 10.1186/1476-4598-9-290

[…] between ysts and germinomas had computationally predicted binding sites in the promoter and upstream regions of the mir-302 cluster. to do this we utilized the sequence motif analysis environment imotifs [], which allows visualisation of nucleotide sequences and identifies motif matches within promoter sequences, using the scanning algorithm included in the nestedmica suite []., we analysed […]

library_books

Metamotifs a generative model for building families of nucleotide position weight matrices

2010
BMC Bioinformatics
PMCID: 2906491
PMID: 20579334
DOI: 10.1186/1471-2105-11-348

[…] nestedmica, the command line interface of nmmetainfer was also designed to be analogous to the motif inference tool nminfer included in the suite., the metamotif visualization was implemented to the imotifs sequence motif visualization environment [] with the mac os x cocoa drawing api (objective-c programming language). metamotif model visualization was also implemented in a java based […]


Want to access the full list of citations?
iMotifs institution(s)
Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, UK

iMotifs reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review iMotifs