IMSindel specifications


Unique identifier OMICS_30146
Name IMSindel
Alternative name InterMediate-Size indel
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Ruby
Computer skills Advanced
Stability Stable
samtools, mafft, glsearch, BioRuby
Maintained Yes



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  • person_outline Tatsuhiko Tsunoda <>
  • person_outline Daichi Shigemizu <>

Publication for InterMediate-Size indel

IMSindel institution(s)
Department for Medical Genome Sciences, Medical Genome Center, National Center for Geriatrics and Gerontology, Aichi, Japan; Department of Medical Science Mathematics, Medical Research Institute, Tokyo Medical and Dental University (TMDU), Tokyo, Japan; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan; Medical Sciences Innovation Hub Program, Cluster for Science and Technology Hub, RIKEN, Yokohama, Japan; CREST, JST, Japan; Niigata University Graduate School of Medical and Dental Sciences, Niigata, Japan; Department of Drug Discovery Medicine, Graduate School of Medicine, Kyoto University, Kyoto, Japan; Division of Regenerative Medicine, Institute for Clinical Research, Osaka National Hospital, National Hospital Organization, Osaka, Japan; Department of Neurosurgery, Osaka National Hospital, National Hospital Organization, Osaka, Japan; Department of Medical Genetics, Osaka Medical Center and Research Institute for Maternal and Child Health, Osaka, Japan; Department of Pediatrics and Neonatology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan; Department of Pediatrics, Showa University School of Medicine, Tokyo, Japan; Department of Pediatric Neurosurgery, Takatsuki General Hospital, Osaka, Japan; Division of Hearing and Balance Research, National Institute of Sensory Organs, National Hospital Organization Tokyo Medical Center, Tokyo, Japan; Center for Medical Genetics, Keio University School of Medicine, Tokyo, Japan
IMSindel funding source(s)
Supported by Te Ichiro Kanehara Foundation, Grant-in-Aid for Young Scientists (Number: 16K19068) of Ministry of Education, Culture, Sports, Science and Technology, and JST CREST (Grant Number JPMJCR1412), Japan.

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