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In Silico Array-CGH ISACGH

Obsolete

Allows visualizing array CGH data or/and expression arrays onto human or mouse chromosomal coordinates (automatically found through their standard identifiers) and represents the regions with copy number alterations found by using different methods. Correlations between copy number and gene expression level can be visualized in different plots. The program finds minimal common regions with altered copy number across different arrays. Although ISACGH can be used alone, it is tightly integrated into the GEPAS and Babelomics packages.

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ISACGH forum

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ISACGH classification

ISACGH specifications

Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux
Stability:
Stable
Interface:
Graphical user interface
Biological technology:
Agilent Technologies
Computer skills:
Medium
Maintained:
No

ISACGH distribution

versioning

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No versioning.

ISACGH support

Maintainer

This tool is not available anymore.

Credits

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Publications

Institution(s)

Bioinformatics Department, Centro de Investigación Príncipe Felipe (CIPF), Valencia, Spain; Functional Genomics Node, INB, CIPF, Valencia, Spain

Link to literature

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