is-rSNP specifications


Unique identifier OMICS_01930
Name is-rSNP
Alternative name In silico regulatory SNP detection
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes


This tool is not available anymore.

is-rSNP article

is-rSNP citations

PMCID: 4643966

[…] variants. haploreg v3 ( was employed to identify chromatin states, conservation and regulatory motif alterations of risk variants and snps [27]. in addition, is-rsnp ( was used to predict whether a snp is a regulatory snp and the set of transcription factors (tfs) with affected binding [28]. […]

PMCID: 4222374

[…] sas (v9.3, sas institute inc, cary, nc, usa) software. the regional plot was plotted from the locuszoom, a web-based plotting tool ( [22]. the in silico prediction tool is-rsnp was used to predict potential regulatory snps (rsnps) [23]., a total of 574 type 2 diabetes study participants, comprising 217 cases of dn and 357 type 2 diabetes patients without dn […]

is-rSNP institution(s)
Department of Computer Science and Software Engineering; NICTA, Victoria Research Lab, The University of Melbourne, Victoria; Bioinformatics and Systems Integration, The Blood and DNA Profiling Facility, Baker IDI Heart and Diabetes Institute, Prahran, Victoria; Metastasis Research Lab, Peter MacCallum Cancer Centre, St Andrews Place, East Melbourne, Victoria; Department of Biochemistry and Molecular Biology. The University of Melbourne, Victoria, Australia

is-rSNP review

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There is no standalone version for this tool. For the web service, the tool restricts the maximum number of input SNPs as 20.