iFORM specifications

Information


Unique identifier OMICS_14562
Name iFORM
Alternative name incorporating Find Occurrence of Regulatory Motifs
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A DNA sequence or a genomic coordinates, TF motifs
Input format FASTA, BED, GFF
Output data A ranked list of motif instances.
Output format XML, CisML, TXT, GFF
Operating system Unix/Linux, Mac OS
Programming languages C
Computer skills Advanced
Version 2.2.1
Stability Stable
Requirements GSL
Maintained Yes

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Maintainer


  • person_outline Wenjie Shu <>

iFORM article

iFORM institution(s)
Department of Biotechnology, Beijing Institute of Radiation Medicine, Beijing, China
iFORM funding source(s)
This work was supported by grants from the Major Research plan of the National Natural Science Foundation of China (No. U1435222), the Program of International S&T Cooperation (No. 2014DFB30020) and the National High Technology Research and Development Program of China (No. 2015AA020108).

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