iFORM specifications

Unique identifier:
OMICS_14562
Software type:
Package/Module
Restrictions to use:
None
Input format:
FASTA, BED, GFF
Output format:
XML, CisML, TXT, GFF
Programming languages:
C
Version:
2.2.1
Requirements:
GSL
Name:
incorporating Find Occurrence of Regulatory Motifs
Interface:
Command line interface
Input data:
A DNA sequence or a genomic coordinates, TF motifs
Output data:
A ranked list of motif instances.
Operating system:
Unix/Linux, Mac OS
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

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iFORM distribution

download

iFORM support

Documentation

Maintainer

  • Wenjie Shu <>

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Publications

Institution(s)

Department of Biotechnology, Beijing Institute of Radiation Medicine, Beijing, China

Funding source(s)

This work was supported by grants from the Major Research plan of the National Natural Science Foundation of China (No. U1435222), the Program of International S&T Cooperation (No. 2014DFB30020) and the National High Technology Research and Development Program of China (No. 2015AA020108).

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