InDelFixer statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Read alignment chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

InDelFixer specifications

Information


Unique identifier OMICS_22783
Name InDelFixer
Software type Application/Script
Interface Command line interface
Restrictions to use None
Output format SAM
Biological technology Illumina, Roche
Operating system Unix/Linux
Programming languages Java
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.1
Stability Stable
Requirements
JDK
Maintained Yes

Download


Versioning


Add your version

Maintainer


  • person_outline Armin Topfer <>

InDelFixer in publication

PMCID: 4132706
PMID: 24972832
DOI: 10.1093/nar/gku537

[…] and analyzed by using bioedit 7, phylip 3.68 and mega 5., the read data sets from the three ngs platforms 454/roche, illumina and pacbio, were converted to fastq files. for 454/roche and pacbio, the indelfixer software (http://www.cbg.ethz.ch/software/indelfixer/) was used to first extract reads and to perform quality clipping from both ends of the reads with a phred threshold of 30. second, […]


To access a full list of publications, you will need to upgrade to our premium service.

InDelFixer reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review InDelFixer