INDELseek specifications

Unique identifier:
OMICS_16232
Software type:
Package/Module
Restrictions to use:
Academic or non-commercial use
Input format:
BAM, SAM
Output format:
VCF
Programming languages:
Perl
Stability:
Stable
Maintained:
Yes
Name:
INDELseek
Interface:
Command line interface
Input data:
The alignments files.
Output data:
The identified complex indel(s) at single read level.
Operating system:
Unix/Linux
Computer skills:
Advanced
Requirements:
SAMtools, GNU Parallel

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INDELseek distribution

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INDELseek support

Documentation

Maintainer

  • Chun Hang Au <>

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Publications

Funding source(s)

This work was supported by the Hong Kong Hereditary Breast Cancer Family Registry, Dr. Ellen Li Charitable Foundation, and the S K Yee Medical Foundation.

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