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Influenza Virus Resource specifications


Unique identifier OMICS_03092
Name Influenza Virus Resource
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained Yes


  • Viruses
    • Influenza A virus
    • Influenza A virus (A/Puerto Rico/8/1934(H1N1))
    • Influenza B virus


  • person_outline Yiming Bao

Publication for Influenza Virus Resource

Influenza Virus Resource citations


Phylogenetic Analysis and Characterization of a Sporadic Isolate of Equine Influenza A H3N8 from an Unvaccinated Horse in 2015

PMCID: 5795444
PMID: 29324680
DOI: 10.3390/v10010031
call_split See protocol

[…] milar sequences (megablast), was conducted for all the eight gene segments of A/equine/Montana/9564-1/2015 (H3N8) [].Both canine and equine nucleotide sequences of H3N8 subtype were acquired from the influenza virus resource (, accessed 5 January 2018) and phylogenetic analyses were performed using MEGA 7.0 [,]. Nucleotide […]


Genetic evolution of influenza H9N2 viruses isolated from various hosts in China from 1994 to 2013

PMCID: 5717095
PMID: 29184157
DOI: 10.1038/emi.2017.94
call_split See protocol

[…] lated in China from 1994 to 2013 and related sequences were downloaded from the Influenza Research Database (, Global Initiative on Sharing Avian Influenza Data ( and the Influenza Virus Resource at the National Center for Biotechnology Information ( The accession numbers of the previously published sequences were summarized in the ( […]


Influenza Herd Level Prevalence and Seasonality in Breed to Wean Pig Farms in the Midwestern USA

PMCID: 5641542
PMID: 29075636
DOI: 10.3389/fvets.2017.00167
call_split See protocol

[…] ) (). H1 clade classification was done using the swine H1 clade classification tool in the Influenza Research Database (IRD) ().For H3 cluster classification, reference strains were obtained from the Influenza Virus Resource at the National Center for Biotechnology Information (NCBI) (). Included H3 reference strains were under the following GenBank reference numbers: JX092535 (H3 IV C), JX092307 […]


Surveillance for highly pathogenic influenza A viruses in California during 2014–2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway

PMCID: 5625317
PMID: 28874792
DOI: 10.1038/emi.2017.66

[…] om samples collected in East Asia (Japan, South Korea and Taiwan) and North America (Canada and United States) from 2010 to 2016 were downloaded from the National Center for Biotechnology Information Influenza Virus Resource database in December 2016. Only full-length or near-full-length genomic segments that were associated with a full date of collection (DD/MM/YYYY) were included. Sequences for […]


Characterization of Novel Reassortant Influenza A (H5N2) Viruses Isolated from Poultry in Eastern China, 2015

Front Microbiol
PMCID: 5403823
PMID: 28487690
DOI: 10.3389/fmicb.2017.00741
call_split See protocol

[…] those of the reference viruses. The classical reference viruses were selected based on previous reports (; ; ; ), and the reference sequences of the strains used in this study were obtained from the Influenza Virus Resource. The sequences were analyzed using BioEdit version DNA software. Phylogenetic trees were constructed using molecular evolutionary genetics analysis (MEGA) software ver […]


Swine Influenza Virus (H1N2) Characterization and Transmission in Ferrets, Chile

PMCID: 5324791
PMID: 28098524
DOI: 10.3201/eid2302.161374

[…] We performed sequence assembly and editing by using BioEdit version 7.2.5 () and sequence alignment with MUSCLE version 3.8.3 (). Reference sequences were obtained from the Influenza Virus Resource at NCBI (). Phylogenic relationships for each gene was inferred by maximum likelihood, incorporating a general time-reversible model of nucleotide substitution with a gamma-di […]


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Influenza Virus Resource institution(s)
National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA
Influenza Virus Resource funding source(s)
Supported by the Intramural Research Program of the NIH, National Library of Medicine.

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