Infobiotics Workbench specifications


Unique identifier OMICS_28300
Name Infobiotics Workbench
Software type Framework/Library, Toolkit/Suite
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes




No version available



  • person_outline Natalio Krasnogor

Additional information

Publication for Infobiotics Workbench

Infobiotics Workbench citation


Stochastic and deterministic multiscale models for systems biology: an auxin transport case study

BMC Syst Biol
PMCID: 2873313
PMID: 20346112
DOI: 10.1186/1752-0509-4-34

[…] l parameter to zero to enable efficient execution. The computational model is executed using a novel multi-compartment Monte Carlo stochastic algorithm using the mcss simulator, which is part of the Infobiotics workbench, a freely available software suite for designing, simulating and analysing multiscale executable systems and synthetic biology models []. Stochastic algorithms and software suppo […]

Infobiotics Workbench institution(s)
Automated Scheduling, Optimisation and Planning Group, School of Computer Science, University of Nottingham, Nottingham, UK; The Centre for Plant Integrative Biology, School of Biosciences, University of Nottingham, UK; Department of Computer Science and Artificial Intelligence, University of Seville, Seville, Spain
Infobiotics Workbench funding source(s)
Supported by EPSRC (EP/J004111/1, EP/I031642/1); BBSRC (BB/D019613/1); Juan de la Cierva fellowship (Grant TIN2009-13192).

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