Informatics for RNA-seq statistics

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Informatics for RNA-seq specifications

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Unique identifier OMICS_16746
Name Informatics for RNA-seq
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Perl, R, Shell (Bash)
License Other
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Malachi Griffith <>

Publication for Informatics for RNA-seq

Informatics for RNA-seq citation

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Continuing Education Workshops in Bioinformatics Positively Impact Research and Careers

2016
PMCID: 4900641
PMID: 27281025
DOI: 10.1371/journal.pcbi.1004916

[…] sequence data from commonly used next-generation sequencing platforms, or analysis challenge, such as what to do with a gene list, is addressed by the workshop. an example workflow for the informatics for rna-seq analysis workshop is provided in []. within the workshop, faculty provide brief lectures on the data analysis concepts and bioinformatic approach as well as give an overview […]


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Informatics for RNA-seq institution(s)
McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA; Siteman Cancer Center, Washington University School of Medicine, St. Louis, MO, USA; Department of Genetics, Washington University School of Medicine, St. Louis, MO, USA; Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA
Informatics for RNA-seq funding source(s)
This work was supported by NIH award K99HG007940 and K22CA188163.

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