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Information retrieval software tools | Biomedical text mining

Information retrieval steps

Ligandbook
Dataset

Ligandbook

Provides force-field parameters of small and drug-like molecules for all major…

Provides force-field parameters of small and drug-like molecules for all major all-atom force fields. Ligandbook aims to enable parameter re-use and simulation reproducibility by (1) facilitating the…

i-librarian
Web

i-librarian I Librarian

Enables cataloging, annotating, browsing and fast searching in reference data…

Enables cataloging, annotating, browsing and fast searching in reference data and PDF files. I, Librarian is a PDF manager or PDF organizer, which enables researchers, scholars, or students to create…

TIES
Web

TIES Text Information Extraction System

Identifies, annotates, and indexes clinical documents. TIES is a natural…

Identifies, annotates, and indexes clinical documents. TIES is a natural language processing (NLP) pipeline and clinical document search engine. It supports tissue ordering and acquisition, building…

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