Ingenuity Variant Analysis specifications

Information


Unique identifier OMICS_05452
Name Ingenuity Variant Analysis
Interface Web user interface
Restrictions to use License purchase required
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Ingenuity Variant Analysis Team <>

Additional information


A free trial is available on the site upon request. A registration is needed to access to tools.

Ingenuity Variant Analysis citations

 (3)
2018
PMCID: 5839370

[…] that are homozygous. if the mutation occurs with a mutation percentage ≤ 80%, the mutation is excluded if the ratio of forward and reverse reads is < 0.1. variants were then annotated using ingenuity variant analysis (iva, 2017 winter release) software (qiagen, redwood city, ca). variants referenced in iva proprietary knowledge base with an allele frequency ≥ 1% in the general […]

2016
PMCID: 4887894

[…] performed using nextgene® software (version 2.4.1; softgenetics, llc., state college, pa, usa). all single nucleotide variants (snvs) and indels were saved in a vcf file format, and upladed to the ingenuity variant analysis platform (qiagen gmbh) for biological analysis and interpretation., the candidate variants obtained from wes were first screened by the databases of the 1000 genomes […]

2014
PMCID: 4299714

[…] hiseq 2000 platform at 75 base paired-end sequencing (san diego, ca). sequence output was inspected and aligned against human reference genome hg19, and variants were filtered and annotated using ingenuity variant analysis tool by the university of michigan bioinformatics core. in the yale center for genome analysis, the exome sequencing and subsequent analysis were modified from a previous […]

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