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IGB | Free software for distribution and exploration of genome-scale datasets

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An easy-to-use, highly customizable genome browser you can use to view and explore genomic data and annotations, especially RNA-Seq and ChIP-Seq data sets. IGB supports real-time zooming and panning through a genome; layout of genomic features and datasets in moveable, adjustable tiers; incremental or genome-scale data loading from remote web servers or local files; and dynamic manipulation of quantitative data via genome graphs. We enhanced IGB's ability to consume data from diverse sources, including Galaxy, Distributed Annotation, and IGB-specific Quickload servers. To support future visualization needs as new genome-scale assays enter wide use, we transformed the IGB codebase into a modular, extensible platform for developers to create and deploy all-new visualizations of genomic data.

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IGB forum

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IGB classification

IGB specifications

Unique identifier:
OMICS_00916
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Java
Computer skills:
Medium
Maintained:
Yes
Name:
Integrated Genome Browser
Interface:
Graphical user interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
Common Public License Version 1.0
Stability:
Stable
Wikipedia:
https://en.wikipedia.org/wiki/Integrated_Genome_Browser

IGB distribution

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IGB support

Maintainer

  • Ann Loraine <>

Credits

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Publications

Institution(s)

Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Kannapolis, NC, USA

Funding source(s)

This work was supported by the National Institutes of Health [R01GM103463].

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