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IntelliGO specifications

Information


Unique identifier OMICS_15015
Name IntelliGO
Interface Web user interface
Restrictions to use None
Programming languages C++
Computer skills Basic
Stability No
Maintained No

Maintainer


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Publication for IntelliGO

IntelliGO in publications

 (2)
PMCID: 3904913
PMID: 24489737
DOI: 10.1371/journal.pone.0086525

[…] with which it annotates a gene using the gene ontology annotations (goa) database . goa specifies also how each annotation has be attributed through evidence codes (ec). in their method called “intelligo”, benabderrahmane et al. use a weighting corresponding to each go term ec in addition to their ic . retrieving only the most informative common ancestor to compute a semantic similarity […]

PMCID: 3361142
PMID: 22666244
DOI: 10.1155/2012/975783

[…] the number of edges in the graph to get the path between two terms [, ]. among them, we have the longest shared path (lp) approach implemented in the gostats package of bioconductor [] and the intelligo approach suggested by benabderrahmane et al. []. although these approaches use only the intrinsic structure of the hierarchy under consideration, they generally suffer from the fact […]


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IntelliGO institution(s)
LORIA (CNRS, INRIA, Nancy-Université), Équipe Orpailleur, Campus scientifique, Vandoeuvre-lès-Nancy, France; LBGI, CNRS UMR7104, IGBMC, Illkirch Strasbourg, France
IntelliGO funding source(s)
This work was supported by the French National Institute of Cancer (INCa) and by the Region Lorraine program for research and technology (CPER MISN).

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