InteMAP specifications


Unique identifier OMICS_09523
Name InteMAP
Alternative name Integrated Metagenomic Assembly Pipeline
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux
Programming languages C++, Python, Shell (Bash)
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes



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  • person_outline Huaiqiu Zhu <>

Publication for Integrated Metagenomic Assembly Pipeline

InteMAP institution(s)
State Key Lab for Turbulence and Complex Systems and Department of Biomedical Engineering, College of Engineering, Peking University, Beijing, China; Center for Quantitative Biology, Peking University, Beijing, China; Department of Gastroenterology, Peking University Third Hospital, Beijing, China
InteMAP funding source(s)
This work was supported by the National Key Technology Research and Design Program of China (2012BAI06B02), the National Natural Science Foundation of China (30970667, 11021463, 61131003 and 91231119), National Basic Research Program of China (2011CB707500), and Excellent Doctoral Dissertation Supervisor Funding of Beijing (YB 20101000102).

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