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|Alternative name||Integrated relational Enzyme database|
|Restrictions to use||None|
- person_outline Astrid Fleischmann
Publication for Integrated relational Enzyme database
PDBe: towards reusable data delivery infrastructure at protein data bank in Europe
[…] FTS (Structure Integration with Function, Taxonomy and Sequence, ()), a resource providing residue-level mapping between UniProt KnowledgeBase (UniProtKB) and PDB entries, as well as annotations from IntEnz (), GO (), Pfam (), InterPro (), SCOP (), CATH () and the NCBI taxonomy resources (). Recently, PDBe has carried out a number of improvements to the way SIFTS mappings are derived and presented […]
Reactome pathway analysis: a high performance in memory approach
[…] ities, filled in during curation, Reactome queries Orphanet, Protein Ontology (PRO), IntAct, RHEA, DOCKBlaster, FlyBase, The Human Metabolome Database (HMDB), Zinc, KEGG, UniProt, ENSEMBL, BRENDA and IntEnz to get their cross-references for entities annotated in Reactome. Both, curated and cross-referenced identifiers are included in the analysis lookup table, as explained in the Implementation se […]
Comparative Genomic and Transcriptomic Analysis of Wangiella dermatitidis, A Major Cause of Phaeohyphomycosis and a Model Black Yeast Human Pathogen
[…] mine 6-dehydrogenases (UNGD) UDP-glucose 6-dehydrogenases (UGD), and several experimentally characterized bacterial nucleotide sugar dehydrogenases. Previously classified bacterial sequences from the Integrated relational Enzyme database (http://ebi.ac.uk/intenz) () were compared to fungal genes; these include one UDP-N-acetylglucosamine 6-dehydrogenase (UNGD; EC:220.127.116.11) from Pseudomonas aerugi […]
Characterizing the complexity of enzymes on the basis of their mechanisms and structures with a bio computational analysis
[…] Each complete EC number (node) was determined from the IntEnz database . We only included enzymes with a complete, four-digit EC numbers that have been manually curated (i.e. Swiss-Prot entries)  using the UniProtKB flat-files (the data were last down […]
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