InteractiVenn pipeline

InteractiVenn specifications

Information


Unique identifier OMICS_08640
Name InteractiVenn
Interface Web user interface
Restrictions to use None
Programming languages Javascript
License GNU General Public License version 3.0
Computer skills Basic
Stability Stable
Maintained Yes

Download


Documentation


Maintainers


Additional information


http://www.interactivenn.net/help.html

Publication for InteractiVenn

library_books

InteractiVenn: a web-based tool for the analysis of sets through Venn diagrams.

2015 BMC Bioinformatics
PMID: 25994840
DOI: 10.1186/s12859-015-0611-3

InteractiVenn citations

 (2)
2017
PMCID: 5696741

[…] of the infection. multivariate analysis, such as principal coordinates analysis (pcoa) and construction of heatmaps, were performed using qlucore v3.2 (qlucore, lund, sweden) bioinformatic software. interactivenn (http://www.interactivenn.net/) online software was used to construct the venn diagrams (heberle et al., 2015). analysis of biological significance was based on gene ontologies (gos) […]

2016
PMCID: 5162099

[…] to find out genotypic differences within the same ecotype. the differentially expressed gene sets for each of the three genotypes were depicted in a venn diagram using a web-based method called interactivenn [58]., to identify conserved ssrs among the genotypes, a de novo assembly was conducted for the k5 and vs16 transcripts. these new transcripts and the annotated transcripts […]

InteractiVenn institution(s)
Universidade de Sao Paulo, Instituto de Ciências Matematicas e de Computaçao, São Carlos, Brazil; Laboratório Nacional de Biociências, Campinas, Brazil; Embrapa Informática Agropecuária, Brasilia, Brazil; Universidade Estadual de Campinas, Brazil
InteractiVenn funding source(s)
Supported by the Fundação de Amparo à Pesquisa do Estado de São Paulo and of Conselho Nacional de Desenvolvimento Científico e Tecnológico.

InteractiVenn review

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floem7

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Web
Great tool. Draws diagram for up to six samples, allowing for text size edition, color choosing and opacity adjustment.
Diagram can be exported to svg/png/txt, also sets can be saved locally for later use.