InterMap3D statistics

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Citations per year

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Popular tool citations

chevron_left Structure visualization Co-evolving residue prediction chevron_right
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Tool usage distribution map

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Associated diseases

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InterMap3D specifications

Information


Unique identifier OMICS_08230
Name InterMap3D
Interface Web user interface
Restrictions to use None
Input data Paste a single sequence or an alignment of several sequences in FASTA format.
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Rodrigo Gouveia-Oliveira <>

Publication for InterMap3D

InterMap3D in publications

 (2)
PMCID: 5512854
PMID: 28729758
DOI: 10.6026/97320630013174

[…] was retrieved from the protein data bank (http://www.rcsb.org/pdb)., in order to predict the coevolving sites, the msa file containing the g-domain sequence of ras superfamily were submitted to intermap3d server (http://www.cbs.dtu.dk/services/intermap3d/). intermap3d predicts co-evolving pairs of amino acids from an alignment of protein sequence []. here, "rcw mi" method was chosen […]

PMCID: 3478181
PMID: 23057711
DOI: 10.1186/1471-2105-13-263

[…] the sum of the mutual information matrix over all lines in column j, n is the number of alignment sequences., the coevolving sites prediction in this research was carried out by the above method via intermap3d server [], which is an available server to the general community for predicting and visualizing co-evolving proteins residues., the ccsm libraries are constructed by simultaneously […]


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InterMap3D institution(s)
Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, Denmark

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