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Associated diseases

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InterPred specifications

Information


Unique identifier OMICS_13254
Name InterPred
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Requirements
HH-suite, Modeller, MATLAB
Maintained Yes

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Documentation


Maintainer


  • person_outline Bjorn Wallner <>

Additional information


http://bioinfo.ifm.liu.se/inter/interpred/

Publication for InterPred

InterPred in publications

 (3)
PMCID: 5697114
PMID: 29157213
DOI: 10.1186/s12870-017-1163-7

[…] the national center for biotechnology information (ncbi) under the accession number mf893146- mf893190., yy designed the study, and wrote the manuscript. yy, fx, zj and sln acquisited, analyzed and interpred the data; yy and wl carried out of nrits and trnl-f sequences.khy and zhq participated in its design and coordination and helped to draft the manuscript. wl and zj participated […]

PMCID: 4733110
PMID: 26824843
DOI: 10.1371/journal.pone.0147702

[…] energy (kj/mol) in the 5 deleterious mutated proteins is mainly due to the substitutions, which could affect the functional activity and the stability of the mutated protein [–]. analysis using interpred confirmed that the mutated hba1 was a non-repair protein with the predicted values of -0.056, 7.00e-001 and -0.691. three states of secondary structure were predicted in hba1 protein: helix […]

PMCID: 4567885
PMID: 26380710
DOI: 10.1002/ece3.1647

[…] authors contributed equally to this work., funding information funding was received from interact (projects quantic and interpred) under the european community’s seventh framework programme (to hw, tr and jr), from the university of helsinki (grant number 788/51/2010 to tr), from the academy of finland (grant number […]


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InterPred institution(s)
Division of Bioinformatics, Department of Physics, Chemistry and Biology, Linkoping University, Linkoping, Sweden
InterPred funding source(s)
This work was supported by Swedish Research Council grant number 2012-5270, and the Swedish e-Science Research Center.

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