InterPro specifications

Unique identifier:
OMICS_01694
Restrictions to use:
None
Stability:
Stable
Wikipedia:
https://en.wikipedia.org/wiki/InterPro
Interface:
Web user interface
Computer skills:
Basic
Maintained:
Yes

InterPro specifications

Unique identifier:
OMICS_01694
Interface:
Command line interface
Input data:
A protein sequence.
Output format:
TSV, XML, JSON, GFF3, HTML, SVG
Programming languages:
C++, Java, Perl, Shell (Bash), Other
Computer skills:
Advanced
Stability:
Stable
Software type:
Pipeline/Workflow
Restrictions to use:
None
Input format:
FASTA
Operating system:
Unix/Linux
License:
Apache License version 2.0
Version:
5.24-63.0
Wikipedia:
https://en.wikipedia.org/wiki/InterPro

versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

InterPro distribution

download

InterPro support

Documentation

Maintainer

  • Robert Finn <>
This tool is not maintained anymore.

Additional information

https://github.com/ebi-pf-team/interproscan/wiki

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, UK; Faculty of Life Science and School of Computer Science, The University of Manchester, Manchester, UK; Swiss Institute of Bioinformatics (SIB), CMU, Geneva, Switzerland; Center for Integrative Genomics, University of Lausanne, Lausanne, Switzerland; Department of Biochemistry, University of Geneva, Geneva, Switzerland; Pole Rhone-Alpin de Bio-Informatique (PRABI), Batiment G. Mendel, Universite Claude Bernard, Villeurbanne, France; European Molecular Laboratory (EMBL), Heidelberg, Germany; Department of Computer Science, University of Bristol, Bristol, UK; J. Craig Venter Institute (JCVI), Rockville, MD, USA; Protein Information Resource (PIR), Georgetown University Medical Center, Washington, DC, WA, USA; Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, USA; Structural and Molecular Biology Department, University College London, University of London, London, UK; Division of Bioinformatics, Department of Preventive Medicine, University of Southern California, Los Angeles, CA, USA

Funding source(s)

Supported by Biotechnology and Biological Sciences Research Council (BBSRC) [BB/L024136/1] and European Molecular Biology Laboratory (EMBL) core funds.

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

Related Tools