invertFREGENE pipeline

invertFREGENE specifications

Information


Unique identifier OMICS_15329
Name invertFREGENE
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format XML
Output format TXT
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability Stable
Source code URL https://www.ebi.ac.uk/sites/ebi.ac.uk/files/groups/kersey_service_team/FREGEN/invertfregene.tar.gz
Maintained Yes

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Maintainer


  • person_outline Clive Hoggart <>

invertFREGENE IN pipeline

2015
PMCID: 4700947
PMID: 26560338
DOI: 10.1093/gbe/evv214

[…] h1 homozygous samples (n = 150) (supplementary table s1, supplementary material online). to assess the statistical significance of tajima’s d, genetic data were then simulated under neutrality using invertfregene software (o’reilly et al. 2010) for a total of 1,000 runs. as an overview, the simulation framework begins with the introduction of a 500-kb inversion in a panmictic population […]

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