InVEx specifications

Information


Unique identifier OMICS_00151
Name InVEx
Alternative name Introns Vs Exons
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A reference genome file.
Input format FASTA
Operating system Unix/Linux, Mac OS
Programming languages Python
Computer skills Advanced
Stability Stable
Requirements NumPy, SciPy, Cython, PyFasta
Maintained No

Versioning


Add your version

Maintainer


This tool is not available anymore.

Publication for Introns Vs Exons

InVEx institution(s)
The Broad Institute of Harvard and MIT, Cambridge, MA, USA; Harvard Medical School, Boston, MA, USA; Department of Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Department of Biochemistry and Molecular Biology and Center for Biomolecular Structure and Function, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Department of Systems Biology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Department of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Department of Cancer Biology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Institute for Applied Cancer Science, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA; Center for Cancer Genome Discovery, Dana-Farber Cancer Institute, Boston, MA, USA; Division of Genetics, Brigham and Women’s Hospital, Boston, MA, USA; Department of Surgery, Massachusetts General Hospital, Boston, MA, USA; Department of Molecular Oncology, John Wayne Cancer Institute, Santa Monica, CA, USA; Melanoma Department, John Wayne Cancer Institute, Santa Monica, CA, USA; Division of Immunology, Allergy and Infectious Diseases, Department of Dermatology, Medical University of Vienna and CeMM-Research, Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria; Department of Dermatology, University Hospital Essen, Essen, Germany; Whitehead Institute for Biomedical Research, Cambridge Center, Cambridge, MA, USA
InVEx funding source(s)
Supported by the NHGRI Large Scale Sequencing Program; grant U54 HG003067; the Melanoma Research Alliance; The University of Texas MD Anderson Cancer Center Melanoma Specialized Programs of Research Excellence and Melanoma Informatics, Tissue Resource, and Pathology (core grant P50 CA93459); and the NCI Support Grant (CA-16672).

InVEx reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review InVEx