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IonStar specifications

Information


Unique identifier OMICS_29736
Name IonStar
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes

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Versioning


No version available

Documentation


Maintainers


  • person_outline Jianmin Wang <>
  • person_outline Benjamin Orsburn <>
  • person_outline Jun Qu <>

Publication for IonStar

IonStar citation

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Proteomic Analysis of Combined Gemcitabine and Birinapant in Pancreatic Cancer Cells

2018
PMCID: 5827530
PMID: 29520231
DOI: 10.3389/fphar.2018.00084

[…] database containing both forward and reverse sequences (). both protein and peptide fdr were controlled at <1%, and a minimum of two unique peptides was required., quantitative data analysis in ionstar was achieved by using sieve and ionstar-stat. chromatographic alignment and ion intensity-based ms1 feature detection/extraction was performed using sieve (v2.2, thermo fisher scientific). […]


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IonStar institution(s)
Department of Pharmaceutical Sciences, University at Buffalo, The State University of New York, Buffalo, NY, USA; Center of Excellence in Bioinformatics & Life Science, Buffalo, NY, USA; Department of Biostatistics and Bioinformatics, Roswell Park Comprehensive Cancer Institute, Buffalo, NY, USA; School of Pharmaceutical Sciences, Shandong University, Jinan, China; Department of Molecular and Cellular Biophysics, Roswell Park Comprehensive Cancer Institute, Buffalo, NY, USA; Department of Neurosurgery, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, The State University of New York, Buffalo, NY, USA; Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Frederick, MD, USA

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