iPath pipeline

iPath specifications

Information


Unique identifier OMICS_07437
Name iPath
Alternative name interactive Pathways Explorer
Interface Web user interface
Restrictions to use None
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes

Maintainer


  • person_outline iPath Team <>

Publications for interactive Pathways Explorer

iPath citations

 (2)
2017
PMCID: 5610334

[…] rate (fdr) < 0.05. gene ontology (go) and kyoto encyclopedia of genes and genomes (kegg) analyses were performed using blast2go using default annotation parameters. interactive pathways (ipath) analysis was carried out via interactive pathways explorer v2 (http://pathways.embl.de/)., nadh/nad+ assay and electron transport system activity (etsa) were documented in the supplementary […]

2014
PMCID: 4160712

[…] assignment was performed using the batch web cd-search online tool (http://www.ncbi.nlm.nih.gov/structure/bwrpsb/bwrpsb.cgi). predicted functions were projected on kegg metabolic pathways using the ipath software55 and compared to essential genes identified in the model organism bacillus subtilis56. when species-level taxonomy could not be assigned, higher taxonomic levels were assigned using […]

iPath institution(s)
EMBL, Heidelberg, Germany

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